What you're describing is what JSpOC does. This is their job. They monitor everything, and warn people who operate satellites they can see may be at risk of collision. That paper is just intended to give satellite operators a good feeling that JSpOC is taking care of them and knows what they are doing. It does not enable you to take over JSpOC's job yourself, primarily because doing so at all well involves having access to sources of information they are not going to share with you.
Instructions for signing up to receive conjunction assessment warnings are posted on the web page at https://www.space-track.org/documentation#odr . They say
United States Space Command (USSPACECOM) is committed to promoting a
safe, stable, sustainable, and secure space environment through Space
Situational Awareness (SSA) information sharing. There are three
levels of SSA services: basic, emergency, and advanced. Advanced
services are available to all entities who sign an SSA Sharing
Agreement with USSPACECOM.
USSPACECOM/J535 Strategy, Plans, and Policy negotiates SSA Sharing
Agreements. The SSA Sharing Agreement establishes the parameters
within which data will be exchanged by both signing parties to
facilitate ongoing cooperation and advance spaceflight safety. All
members of the space community, including satellite operators,
launching agencies, commercial service providers, and
research/academic institutions, are welcome to contact
[email protected] for more information on
the agreement process. U.S. government (USG) organizations and their
contractors have implied agreements and do not need to pursue
additional documentation with USSPACECOM.
Whether you are putting your first satellite on orbit, or adding to an
existing constellation, we encourage you to register your asset with
18 SPCS so that we can plan for optimal tracking and identification,
and provide you with conjunction assessment services as soon as
possible. As soon as you register, a member of 18 SPCS will contact
you to discuss the details of your mission and coordinate conjunction
assessment and other required support.
Interestingly, however, in the same zip file in which those who register for a free account on space-track.org (the public web site of the US Space Command's 18th Space Control Squadron (18 SPCS)) can download a working copy of SGP4, there is also a copy of the release notes for the entire Standardized Astrodynamics Algorithms Library (SAAL), including both SGP4 and also the parts of the SAAL that you can only obtain if you are doing official business of the U.S. Government. One of those pieces is the tool they actually use for this purpose. It is called COMBO --- Computation Of Miss Between Orbits. The release notes say (emphasis mine)
Combo computes close approaches between satellite orbits based on
user-specified screening volume, exclusion volume, and warning and
alert thresholds expressed in either standoff radius or asset-centered
UVW (radial, in-track, and cross-track) miss-distance criteria.
Precomputed SGP4, SGP4-XP, or SP-based ephemerides are used in the
evaluation. Note: SGP4 GP-based Combo results are appropriate for
general understanding of the frequency of approaches between objects
and coarse assessment of expected miss distances between objects, but
not appropriate for collision-avoidance decisions. Only high-accuracy
SP ephemerides that include propagated covariance resulting in
computed Probability of Collision $P_c$ should be used for
collision-avoidance decisions.
"SP" is the companion piece of software, the not-SGP4 propagator they use for precision work. Its name, unfortunately, is simply "Special Perturbations", which is terrible because everything that numerically integrates the equations of motion technically deserves the same name (see this answer for the difference between special and general perturbations). SP uses a different kind of data, which does include covariance matrices, and computes motion from them in a totally different way from SGP4. SGP4's job is to be fast, and SP's job is to be accurate. The new "SGP4-XP" is supposed to be a complete rewrite of SGP4, using a much improved theory and much higher-order approximation than was possible 40 years ago, because computing hardware is now so much more powerful, but still using only a TLE-sized input string as control parameters while producing a much more accurate result. Unfortunately, I have yet to find out how to obtain this new data ("TLE Type 4"), so I am unable to test the "eXtended Perturbations" for myself. I suspect what I need is a properly-worded and approved Orbit Data Request form.
The reason for working in radial, in-track, and cross-track coordinates is that for most operational satellites, the position uncertainty as output by the orbit determination software is not spherical, but instead is considerably larger in-track than the other two directions. Determining whether one cigar (or perhaps potato) passes through another is a different problem than determining whether one sphere passes through another, and orientation of those shapes in space is important. In fact, the covariances JSpOC distributes to the small number of people who have been authorized to receive them, are always at least six dimensional (position and velocity), plus sometimes extra things solved for in the fit by the batch differential corrector that computed the state vectors and their associated estimated uncertainties.
collision-avoidance
tag, is that the end goal? $\endgroup$